Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb8Q91XZ2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Gm4875-201ENSMUST00000118257 786 ntBASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdhb8Q91XZ2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Mir6956-201ENSMUST00000183598 62 ntBASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb8Q91XZ2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms