Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Gm17837-201ENSMUST00000186435 985 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Gm37714-201ENSMUST00000194742 342 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Gm6888-201ENSMUST00000221983 706 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga3Q91XY5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Gm15460-201ENSMUST00000118147 391 ntBASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Gm13453-201ENSMUST00000118708 357 ntBASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Gm44344-201ENSMUST00000200287 129 ntBASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Grk6-205ENSMUST00000224653 2976 ntBASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga3Q91XY5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga3Q91XY5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms