Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.63■□□□□ 0.09
Ddx41Q91VN6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Gm27701-201ENSMUST00000184498 110 ntBASIC15.63■□□□□ 0.09
Ddx41Q91VN6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx41Q91VN6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm15806-201ENSMUST00000120696 955 ntBASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm8602-201ENSMUST00000184045 607 ntBASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm28911-201ENSMUST00000188837 117 ntBASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx41Q91VN6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gm18905-201ENSMUST00000205454 928 ntBASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx41Q91VN6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx41Q91VN6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx41Q91VN6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx41Q91VN6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ddx41Q91VN6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx41Q91VN6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx41Q91VN6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx41Q91VN6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms