Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Gm42627-201ENSMUST00000197347 224 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Olfr284-202ENSMUST00000206647 966 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Gm44608-201ENSMUST00000206827 855 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Gm9368-201ENSMUST00000219348 831 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.44□□□□□ -0.26
Vsx1Q91V10 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vsx1Q91V10 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.43□□□□□ -0.26
Vsx1Q91V10 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Gm4271-201ENSMUST00000174444 973 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Mir433-201ENSMUST00000093564 124 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.43□□□□□ -0.26
Vsx1Q91V10 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vsx1Q91V10 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.42□□□□□ -0.26
Vsx1Q91V10 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.42□□□□□ -0.26
Vsx1Q91V10 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.42□□□□□ -0.26
Vsx1Q91V10 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Gm8213-201ENSMUST00000118191 441 ntBASIC13.42□□□□□ -0.26
Vsx1Q91V10 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Vsx1Q91V10 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms