Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Gm11025-201ENSMUST00000140773 466 ntBASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Gm18057-201ENSMUST00000208220 503 ntBASIC11.1□□□□□ -0.63
Nup35Q8R4R6 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.1□□□□□ -0.63
Nup35Q8R4R6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Mir125a-201ENSMUST00000083545 68 ntBASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.09□□□□□ -0.63
Nup35Q8R4R6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Psmb5-202ENSMUST00000227257 622 ntBASIC11.09□□□□□ -0.63
Nup35Q8R4R6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nup35Q8R4R6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Nup35Q8R4R6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nup35Q8R4R6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup35Q8R4R6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms