Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm17271-201ENSMUST00000165535 355 ntBASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Gm6443-201ENSMUST00000203599 874 ntBASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Gm18733-201ENSMUST00000173950 856 ntBASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Gm37714-201ENSMUST00000194742 342 ntBASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd3Q8R1N4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Gm45453-201ENSMUST00000211758 853 ntBASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Mir125a-201ENSMUST00000083545 68 ntBASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd3Q8R1N4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nudcd3Q8R1N4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nudcd3Q8R1N4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nudcd3Q8R1N4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nudcd3Q8R1N4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms