Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gm12485-201ENSMUST00000119641 291 ntBASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gm29127-201ENSMUST00000188304 517 ntBASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc17Q8CE13 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Gm26464-201ENSMUST00000157094 305 ntBASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Gm5370-201ENSMUST00000187187 574 ntBASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc17Q8CE13 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm44608-201ENSMUST00000206827 855 ntBASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm6983-201ENSMUST00000214912 628 ntBASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc17Q8CE13 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms