Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp2bQ8BJF9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.96□□□□□ -0.18
Chmp2bQ8BJF9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2bQ8BJF9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2bQ8BJF9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2bQ8BJF9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Chmp2bQ8BJF9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2bQ8BJF9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2bQ8BJF9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Chmp2bQ8BJF9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2bQ8BJF9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2bQ8BJF9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms