Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nod1Q8BHB0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm23931-201ENSMUST00000103842 109 ntBASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm1335-201ENSMUST00000121653 386 ntBASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm38144-201ENSMUST00000192790 465 ntBASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nod1Q8BHB0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nod1Q8BHB0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nod1Q8BHB0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nod1Q8BHB0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nod1Q8BHB0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nod1Q8BHB0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nod1Q8BHB0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Gm5687-201ENSMUST00000118252 640 ntBASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nod1Q8BHB0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Gm19184-201ENSMUST00000196798 928 ntBASIC14.26□□□□□ -0.13
Nod1Q8BHB0 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nod1Q8BHB0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms