Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Pif1Q80SX8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.59□□□□□ -0.39
Pif1Q80SX8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.59□□□□□ -0.39
Pif1Q80SX8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.59□□□□□ -0.39
Pif1Q80SX8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.59□□□□□ -0.39
Pif1Q80SX8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pif1Q80SX8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Pif1Q80SX8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pif1Q80SX8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Gm29127-201ENSMUST00000188304 517 ntBASIC12.58□□□□□ -0.4
Pif1Q80SX8 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.58□□□□□ -0.4
Pif1Q80SX8 Gm44397-201ENSMUST00000195950 113 ntBASIC12.58□□□□□ -0.4
Pif1Q80SX8 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.58□□□□□ -0.4
Pif1Q80SX8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Gm10012-201ENSMUST00000078252 192 ntBASIC12.58□□□□□ -0.4
Pif1Q80SX8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pif1Q80SX8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pif1Q80SX8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.58□□□□□ -0.4
Pif1Q80SX8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pif1Q80SX8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.57□□□□□ -0.4
Pif1Q80SX8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Pif1Q80SX8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.57□□□□□ -0.4
Pif1Q80SX8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Gm13612-201ENSMUST00000119276 390 ntBASIC12.57□□□□□ -0.4
Pif1Q80SX8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms