Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm27628-201ENSMUST00000184911 107 ntBASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Gm2451-201ENSMUST00000199447 999 ntBASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Gm10290-201ENSMUST00000200451 999 ntBASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Gm18195-201ENSMUST00000207604 706 ntBASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf220Q6PDX6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf220Q6PDX6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf220Q6PDX6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf220Q6PDX6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm15590-201ENSMUST00000078419 552 ntBASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf220Q6PDX6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Mir5131-201ENSMUST00000175426 93 ntBASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms