Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AtmQ62388 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
AtmQ62388 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.59□□□□□ -0.39
AtmQ62388 Gm7666-201ENSMUST00000146631 819 ntBASIC12.59□□□□□ -0.39
AtmQ62388 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.59□□□□□ -0.39
AtmQ62388 Gm20392-201ENSMUST00000173047 701 ntBASIC12.59□□□□□ -0.39
AtmQ62388 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.59□□□□□ -0.39
AtmQ62388 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.59□□□□□ -0.39
AtmQ62388 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
AtmQ62388 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AtmQ62388 Gm15131-201ENSMUST00000119124 595 ntBASIC12.58□□□□□ -0.39
AtmQ62388 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
AtmQ62388 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.58□□□□□ -0.39
AtmQ62388 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.39
AtmQ62388 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.58□□□□□ -0.39
AtmQ62388 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.58□□□□□ -0.39
AtmQ62388 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
AtmQ62388 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
AtmQ62388 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.58□□□□□ -0.39
AtmQ62388 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.58□□□□□ -0.4
AtmQ62388 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.58□□□□□ -0.4
AtmQ62388 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.58□□□□□ -0.4
AtmQ62388 Gm11531-201ENSMUST00000117614 555 ntBASIC12.58□□□□□ -0.4
AtmQ62388 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.58□□□□□ -0.4
AtmQ62388 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.58□□□□□ -0.4
AtmQ62388 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
AtmQ62388 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
AtmQ62388 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.58□□□□□ -0.4
AtmQ62388 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.58□□□□□ -0.4
AtmQ62388 Spcs1-203ENSMUST00000226374 592 ntBASIC12.58□□□□□ -0.4
AtmQ62388 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.58□□□□□ -0.4
AtmQ62388 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.58□□□□□ -0.4
AtmQ62388 Gm8885-201ENSMUST00000189382 598 ntBASIC12.58□□□□□ -0.4
AtmQ62388 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.58□□□□□ -0.4
AtmQ62388 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
AtmQ62388 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AtmQ62388 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.57□□□□□ -0.4
AtmQ62388 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.57□□□□□ -0.4
AtmQ62388 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Gm15770-201ENSMUST00000117498 584 ntBASIC12.57□□□□□ -0.4
AtmQ62388 Gm8738-201ENSMUST00000172606 329 ntBASIC12.57□□□□□ -0.4
AtmQ62388 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.57□□□□□ -0.4
AtmQ62388 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
AtmQ62388 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
AtmQ62388 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.57□□□□□ -0.4
AtmQ62388 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.57□□□□□ -0.4
AtmQ62388 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AtmQ62388 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
AtmQ62388 Gm23218-201ENSMUST00000158124 276 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Gm38210-201ENSMUST00000191944 809 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Gm44262-201ENSMUST00000204969 372 ntBASIC12.56□□□□□ -0.4
AtmQ62388 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
AtmQ62388 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AtmQ62388 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.56□□□□□ -0.4
AtmQ62388 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms