Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.08■□□□□ 0
Ift88Q61371 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ift88Q61371 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ift88Q61371 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ift88Q61371 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Ift88Q61371 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ift88Q61371 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ift88Q61371 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.07■□□□□ 0
Ift88Q61371 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.07■□□□□ 0
Ift88Q61371 Gm8927-201ENSMUST00000181978 981 ntBASIC15.07■□□□□ 0
Ift88Q61371 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ift88Q61371 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.07■□□□□ 0
Ift88Q61371 Gm3222-201ENSMUST00000071282 990 ntBASIC15.07■□□□□ 0
Ift88Q61371 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ift88Q61371 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ift88Q61371 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ift88Q61371 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ift88Q61371 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Ift88Q61371 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.07■□□□□ 0
Ift88Q61371 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ift88Q61371 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ift88Q61371 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.06■□□□□ 0
Ift88Q61371 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.06■□□□□ 0
Ift88Q61371 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.06■□□□□ 0
Ift88Q61371 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.06■□□□□ 0
Ift88Q61371 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.06■□□□□ 0
Ift88Q61371 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ift88Q61371 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ift88Q61371 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.06■□□□□ 0
Ift88Q61371 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ift88Q61371 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ift88Q61371 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ift88Q61371 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ift88Q61371 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ift88Q61371 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ift88Q61371 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ift88Q61371 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ift88Q61371 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ift88Q61371 Gm15653-201ENSMUST00000119247 907 ntBASIC15.05■□□□□ -0
Ift88Q61371 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.05■□□□□ -0
Ift88Q61371 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.05■□□□□ -0
Ift88Q61371 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ift88Q61371 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.05■□□□□ -0
Ift88Q61371 Gm28630-201ENSMUST00000187806 498 ntBASIC15.05■□□□□ -0
Ift88Q61371 Gm10253-201ENSMUST00000194270 940 ntBASIC15.05■□□□□ -0
Ift88Q61371 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ift88Q61371 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.05■□□□□ -0
Ift88Q61371 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.05■□□□□ -0
Ift88Q61371 Gm5779-201ENSMUST00000218467 910 ntBASIC15.05■□□□□ -0
Ift88Q61371 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.05■□□□□ -0
Ift88Q61371 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ift88Q61371 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ift88Q61371 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ift88Q61371 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ift88Q61371 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ift88Q61371 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ift88Q61371 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.05■□□□□ -0
Ift88Q61371 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ift88Q61371 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms