Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Xrcc1Q60596 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Xrcc1Q60596 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Xrcc1Q60596 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Xrcc1Q60596 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Xrcc1Q60596 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Xrcc1Q60596 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Xrcc1Q60596 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Xrcc1Q60596 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Gm12485-201ENSMUST00000119641 291 ntBASIC13.02□□□□□ -0.33
Xrcc1Q60596 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.02□□□□□ -0.33
Xrcc1Q60596 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Gm23984-201ENSMUST00000157139 203 ntBASIC13.02□□□□□ -0.33
Xrcc1Q60596 Mir7654-201ENSMUST00000185082 70 ntBASIC13.02□□□□□ -0.33
Xrcc1Q60596 Gm18307-201ENSMUST00000206864 949 ntBASIC13.02□□□□□ -0.33
Xrcc1Q60596 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.02□□□□□ -0.33
Xrcc1Q60596 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.02□□□□□ -0.33
Xrcc1Q60596 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.02□□□□□ -0.33
Xrcc1Q60596 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Xrcc1Q60596 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.01□□□□□ -0.33
Xrcc1Q60596 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Gm24447-201ENSMUST00000083977 338 ntBASIC13.01□□□□□ -0.33
Xrcc1Q60596 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.01□□□□□ -0.33
Xrcc1Q60596 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Xrcc1Q60596 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Xrcc1Q60596 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Xrcc1Q60596 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xrcc1Q60596 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Xrcc1Q60596 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xrcc1Q60596 Gm20632-201ENSMUST00000176760 2427 ntBASIC13□□□□□ -0.33
Xrcc1Q60596 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Xrcc1Q60596 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Xrcc1Q60596 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Xrcc1Q60596 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Xrcc1Q60596 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms