Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf20Q5DTM8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf20Q5DTM8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf20Q5DTM8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.21■□□□□ 0.18
Rnf20Q5DTM8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf20Q5DTM8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Gm25925-201ENSMUST00000158314 306 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Gm21854-201ENSMUST00000179901 471 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf20Q5DTM8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm14719-201ENSMUST00000121891 340 ntBASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm29667-201ENSMUST00000190817 490 ntBASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf20Q5DTM8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms