Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn2bQ56A07 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Scn2bQ56A07 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Gm6888-201ENSMUST00000221983 706 ntBASIC13.48□□□□□ -0.25
Scn2bQ56A07 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.48□□□□□ -0.25
Scn2bQ56A07 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn2bQ56A07 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Gm25925-201ENSMUST00000158314 306 ntBASIC13.47□□□□□ -0.25
Scn2bQ56A07 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.47□□□□□ -0.25
Scn2bQ56A07 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.47□□□□□ -0.25
Scn2bQ56A07 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.47□□□□□ -0.25
Scn2bQ56A07 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn2bQ56A07 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Gm13453-201ENSMUST00000118708 357 ntBASIC13.46□□□□□ -0.25
Scn2bQ56A07 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scn2bQ56A07 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scn2bQ56A07 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Scn2bQ56A07 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Scn2bQ56A07 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms