Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.67□□□□□ -0.54
Tmem40Q4FJU9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tmem40Q4FJU9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Gm27486-201ENSMUST00000184923 80 ntBASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Gm45331-201ENSMUST00000209868 554 ntBASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Gm5425-201ENSMUST00000214125 459 ntBASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tmem40Q4FJU9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms