Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upf3aQ3ULJ3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Gm25927-201ENSMUST00000175058 117 ntBASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Gm43822-201ENSMUST00000200285 476 ntBASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upf3aQ3ULJ3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Gm25261-201ENSMUST00000157416 134 ntBASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upf3aQ3ULJ3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Gm11793-201ENSMUST00000120433 981 ntBASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Gm13123-201ENSMUST00000122173 492 ntBASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Upf3aQ3ULJ3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms