Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Gm12341-201ENSMUST00000119724 503 ntBASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Gm45668-201ENSMUST00000211271 493 ntBASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Gm15823-201ENSMUST00000064305 670 ntBASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf44Q3UHJ8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf44Q3UHJ8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf44Q3UHJ8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf44Q3UHJ8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf44Q3UHJ8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf44Q3UHJ8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf44Q3UHJ8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf44Q3UHJ8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf44Q3UHJ8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms