Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Limch1Q3UH68 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.03■□□□□ 0.16
Limch1Q3UH68 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.03■□□□□ 0.16
Limch1Q3UH68 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.03■□□□□ 0.16
Limch1Q3UH68 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Gm8927-201ENSMUST00000181978 981 ntBASIC16.03■□□□□ 0.16
Limch1Q3UH68 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.03■□□□□ 0.16
Limch1Q3UH68 Gm18624-201ENSMUST00000220966 658 ntBASIC16.03■□□□□ 0.16
Limch1Q3UH68 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Gm3222-201ENSMUST00000071282 990 ntBASIC16.03■□□□□ 0.16
Limch1Q3UH68 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Limch1Q3UH68 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Limch1Q3UH68 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.02■□□□□ 0.16
Limch1Q3UH68 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Gm4804-201ENSMUST00000182234 999 ntBASIC16.02■□□□□ 0.16
Limch1Q3UH68 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.02■□□□□ 0.16
Limch1Q3UH68 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limch1Q3UH68 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Limch1Q3UH68 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.01■□□□□ 0.15
Limch1Q3UH68 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Gm12585-201ENSMUST00000117307 290 ntBASIC16.01■□□□□ 0.15
Limch1Q3UH68 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms