Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Mir7085-201ENSMUST00000184353 66 ntBASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Gm27701-201ENSMUST00000184498 110 ntBASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Gm44719-201ENSMUST00000206404 149 ntBASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Khdc4Q3TCX3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Gm17150-201ENSMUST00000165577 381 ntBASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Khdc4Q3TCX3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Khdc4Q3TCX3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.96□□□□□ -0.34
Khdc4Q3TCX3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc4Q3TCX3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc4Q3TCX3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc4Q3TCX3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc4Q3TCX3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc4Q3TCX3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Khdc4Q3TCX3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc4Q3TCX3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc4Q3TCX3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc4Q3TCX3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc4Q3TCX3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc4Q3TCX3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms