Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Gm7488-201ENSMUST00000117148 684 ntBASIC10.54□□□□□ -0.72
Cdx4Q07424 Gm11424-201ENSMUST00000121929 829 ntBASIC10.54□□□□□ -0.72
Cdx4Q07424 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Gm8584-201ENSMUST00000171982 758 ntBASIC10.54□□□□□ -0.72
Cdx4Q07424 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cdx4Q07424 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.54□□□□□ -0.72
Cdx4Q07424 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cdx4Q07424 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdx4Q07424 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdx4Q07424 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.54□□□□□ -0.72
Cdx4Q07424 Rubie-203ENSMUST00000227803 2430 ntBASIC10.54□□□□□ -0.72
Cdx4Q07424 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdx4Q07424 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.53□□□□□ -0.72
Cdx4Q07424 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.53□□□□□ -0.72
Cdx4Q07424 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Cdx4Q07424 Gm24694-201ENSMUST00000180054 110 ntBASIC10.53□□□□□ -0.72
Cdx4Q07424 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Gm27663-201ENSMUST00000184839 110 ntBASIC10.53□□□□□ -0.72
Cdx4Q07424 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.53□□□□□ -0.72
Cdx4Q07424 Gm5425-201ENSMUST00000214125 459 ntBASIC10.53□□□□□ -0.72
Cdx4Q07424 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cdx4Q07424 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.53□□□□□ -0.72
Cdx4Q07424 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdx4Q07424 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.53□□□□□ -0.72
Cdx4Q07424 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.52□□□□□ -0.72
Cdx4Q07424 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.52□□□□□ -0.72
Cdx4Q07424 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx4Q07424 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx4Q07424 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx4Q07424 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx4Q07424 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Cdx4Q07424 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx4Q07424 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx4Q07424 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx4Q07424 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdx4Q07424 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cdx4Q07424 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdx4Q07424 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Gm4875-201ENSMUST00000118257 786 ntBASIC10.52□□□□□ -0.73
Cdx4Q07424 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cdx4Q07424 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.52□□□□□ -0.73
Cdx4Q07424 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cdx4Q07424 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cdx4Q07424 Gm5745-201ENSMUST00000183748 313 ntBASIC10.52□□□□□ -0.73
Cdx4Q07424 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.52□□□□□ -0.73
Cdx4Q07424 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.52□□□□□ -0.73
Cdx4Q07424 Gm18041-201ENSMUST00000218210 618 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms