Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrn1P97789 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrn1P97789 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrn1P97789 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrn1P97789 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Xrn1P97789 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC18.91■□□□□ 0.62
Xrn1P97789 Gm8018-201ENSMUST00000173536 789 ntBASIC18.91■□□□□ 0.62
Xrn1P97789 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Gm27023-201ENSMUST00000182372 285 ntBASIC18.91■□□□□ 0.62
Xrn1P97789 Gm34767-201ENSMUST00000191813 1062 ntBASIC18.91■□□□□ 0.62
Xrn1P97789 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Gm45770-201ENSMUST00000212105 616 ntBASIC18.91■□□□□ 0.62
Xrn1P97789 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC18.91■□□□□ 0.62
Xrn1P97789 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Xrn1P97789 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Xrn1P97789 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.91■□□□□ 0.62
Xrn1P97789 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC18.91■□□□□ 0.62
Xrn1P97789 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC18.91■□□□□ 0.62
Xrn1P97789 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Xrn1P97789 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC18.91■□□□□ 0.62
Xrn1P97789 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
Xrn1P97789 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Xrn1P97789 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Gm43908-201ENSMUST00000205074 1472 ntBASIC18.91■□□□□ 0.62
Xrn1P97789 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrn1P97789 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC18.9■□□□□ 0.62
Xrn1P97789 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC18.9■□□□□ 0.62
Xrn1P97789 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Xrn1P97789 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC18.9■□□□□ 0.62
Xrn1P97789 Gm43416-201ENSMUST00000201916 1015 ntBASIC18.9■□□□□ 0.62
Xrn1P97789 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC18.9■□□□□ 0.62
Xrn1P97789 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC18.9■□□□□ 0.62
Xrn1P97789 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC18.9■□□□□ 0.62
Xrn1P97789 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Crry-ps-201ENSMUST00000079090 1309 ntBASIC18.9■□□□□ 0.62
Xrn1P97789 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrn1P97789 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Xrn1P97789 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
Xrn1P97789 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Xrn1P97789 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Xrn1P97789 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Xrn1P97789 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Xrn1P97789 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Xrn1P97789 Gm11930-201ENSMUST00000117788 190 ntBASIC18.89■□□□□ 0.61
Xrn1P97789 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC18.89■□□□□ 0.61
Xrn1P97789 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 Mir1943-201ENSMUST00000158276 73 ntBASIC18.89■□□□□ 0.61
Xrn1P97789 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 Gm18734-201ENSMUST00000172937 808 ntBASIC18.89■□□□□ 0.61
Xrn1P97789 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.89■□□□□ 0.61
Xrn1P97789 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.89■□□□□ 0.61
Xrn1P97789 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 AC154725.1-201ENSMUST00000224826 1961 ntBASIC18.89■□□□□ 0.61
Xrn1P97789 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Xrn1P97789 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Xrn1P97789 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrn1P97789 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Xrn1P97789 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC18.89■□□□□ 0.61
Xrn1P97789 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC18.88■□□□□ 0.61
Xrn1P97789 n-R5s14-201ENSMUST00000122688 107 ntBASIC18.88■□□□□ 0.61
Xrn1P97789 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms