Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Thumpd3P97770 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.87□□□□□ -0.19
Thumpd3P97770 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Thumpd3P97770 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Gm25144-201ENSMUST00000179561 110 ntBASIC13.87□□□□□ -0.19
Thumpd3P97770 Gm25352-201ENSMUST00000179815 110 ntBASIC13.87□□□□□ -0.19
Thumpd3P97770 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Mir8102-201ENSMUST00000184148 139 ntBASIC13.87□□□□□ -0.19
Thumpd3P97770 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.87□□□□□ -0.19
Thumpd3P97770 Gm18766-201ENSMUST00000189811 808 ntBASIC13.87□□□□□ -0.19
Thumpd3P97770 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.87□□□□□ -0.19
Thumpd3P97770 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.87□□□□□ -0.19
Thumpd3P97770 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.87□□□□□ -0.19
Thumpd3P97770 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd3P97770 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.86□□□□□ -0.19
Thumpd3P97770 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Thumpd3P97770 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.86□□□□□ -0.19
Thumpd3P97770 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.86□□□□□ -0.19
Thumpd3P97770 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Thumpd3P97770 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.86□□□□□ -0.19
Thumpd3P97770 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Thumpd3P97770 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.86□□□□□ -0.19
Thumpd3P97770 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
Thumpd3P97770 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Thumpd3P97770 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd3P97770 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.85□□□□□ -0.19
Thumpd3P97770 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Thumpd3P97770 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.85□□□□□ -0.19
Thumpd3P97770 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.85□□□□□ -0.19
Thumpd3P97770 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd3P97770 Gm15957-201ENSMUST00000118893 974 ntBASIC13.85□□□□□ -0.19
Thumpd3P97770 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.85□□□□□ -0.19
Thumpd3P97770 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms