Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm2383-201ENSMUST00000181461 807 ntBASIC16.97■□□□□ 0.31
Smarcc1P97496 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.97■□□□□ 0.31
Smarcc1P97496 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.97■□□□□ 0.31
Smarcc1P97496 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.97■□□□□ 0.31
Smarcc1P97496 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.97■□□□□ 0.31
Smarcc1P97496 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc1P97496 Gm7046-201ENSMUST00000221351 977 ntBASIC16.97■□□□□ 0.31
Smarcc1P97496 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.97■□□□□ 0.31
Smarcc1P97496 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc1P97496 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcc1P97496 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Smarcc1P97496 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.96■□□□□ 0.31
Smarcc1P97496 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.96■□□□□ 0.31
Smarcc1P97496 Gm8805-201ENSMUST00000117848 313 ntBASIC16.96■□□□□ 0.31
Smarcc1P97496 Gm4986-201ENSMUST00000119731 549 ntBASIC16.96■□□□□ 0.31
Smarcc1P97496 Gm2231-201ENSMUST00000125661 612 ntBASIC16.96■□□□□ 0.31
Smarcc1P97496 Gm20482-202ENSMUST00000174729 825 ntBASIC16.96■□□□□ 0.31
Smarcc1P97496 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.96■□□□□ 0.31
Smarcc1P97496 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc1P97496 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc1P97496 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc1P97496 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Smarcc1P97496 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.96■□□□□ 0.3
Smarcc1P97496 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc1P97496 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc1P97496 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc1P97496 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Smarcc1P97496 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
Smarcc1P97496 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.95■□□□□ 0.3
Smarcc1P97496 Gm7809-201ENSMUST00000153199 742 ntBASIC16.95■□□□□ 0.3
Smarcc1P97496 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Smarcc1P97496 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc1P97496 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.94■□□□□ 0.3
Smarcc1P97496 Gm12997-201ENSMUST00000120207 640 ntBASIC16.94■□□□□ 0.3
Smarcc1P97496 Gm25668-201ENSMUST00000157700 129 ntBASIC16.94■□□□□ 0.3
Smarcc1P97496 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcc1P97496 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smarcc1P97496 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc1P97496 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc1P97496 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc1P97496 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Smarcc1P97496 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms