Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Msx3P70354 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14□□□□□ -0.17
Msx3P70354 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14□□□□□ -0.17
Msx3P70354 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14□□□□□ -0.17
Msx3P70354 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Msx3P70354 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Gm14452-201ENSMUST00000118680 1632 ntBASIC14□□□□□ -0.17
Msx3P70354 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Gm20632-201ENSMUST00000176760 2427 ntBASIC14□□□□□ -0.17
Msx3P70354 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Msx3P70354 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Msx3P70354 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Msx3P70354 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.99□□□□□ -0.17
Msx3P70354 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.99□□□□□ -0.17
Msx3P70354 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Msx3P70354 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.99□□□□□ -0.17
Msx3P70354 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.99□□□□□ -0.17
Msx3P70354 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Msx3P70354 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.98□□□□□ -0.17
Msx3P70354 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.98□□□□□ -0.17
Msx3P70354 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 Gm17795-201ENSMUST00000214505 757 ntBASIC13.98□□□□□ -0.17
Msx3P70354 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Msx3P70354 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.98□□□□□ -0.17
Msx3P70354 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.98□□□□□ -0.17
Msx3P70354 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Msx3P70354 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Msx3P70354 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms