Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.16□□□□□ -0.3
Tnfsf4P43488 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.16□□□□□ -0.3
Tnfsf4P43488 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.16□□□□□ -0.3
Tnfsf4P43488 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf4P43488 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.15□□□□□ -0.3
Tnfsf4P43488 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Gm15653-201ENSMUST00000119247 907 ntBASIC13.15□□□□□ -0.3
Tnfsf4P43488 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.15□□□□□ -0.3
Tnfsf4P43488 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.15□□□□□ -0.3
Tnfsf4P43488 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.15□□□□□ -0.3
Tnfsf4P43488 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Tnfsf4P43488 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.14□□□□□ -0.31
Tnfsf4P43488 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm6415-201ENSMUST00000118488 348 ntBASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm8927-201ENSMUST00000181978 981 ntBASIC13.14□□□□□ -0.31
Tnfsf4P43488 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Shd-206ENSMUST00000225145 998 ntBASIC13.14□□□□□ -0.31
Tnfsf4P43488 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm3222-201ENSMUST00000071282 990 ntBASIC13.14□□□□□ -0.31
Tnfsf4P43488 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tnfsf4P43488 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms