Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.25□□□□□ -0.61
Hist1h1aP43275 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hist1h1aP43275 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hist1h1aP43275 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gm2445-201ENSMUST00000182798 989 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gm27494-201ENSMUST00000184735 189 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gm18049-201ENSMUST00000208909 581 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.24□□□□□ -0.61
Hist1h1aP43275 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1aP43275 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.23□□□□□ -0.61
Hist1h1aP43275 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.23□□□□□ -0.61
Hist1h1aP43275 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 BC001981-202ENSMUST00000191393 1545 ntBASIC11.23□□□□□ -0.61
Hist1h1aP43275 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms