Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.32□□□□□ -0.92
Smim1P0C8K7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.32□□□□□ -0.92
Smim1P0C8K7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC9.32□□□□□ -0.92
Smim1P0C8K7 Gm11950-201ENSMUST00000121615 838 ntBASIC9.32□□□□□ -0.92
Smim1P0C8K7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Gm44608-201ENSMUST00000206827 855 ntBASIC9.32□□□□□ -0.92
Smim1P0C8K7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smim1P0C8K7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.31□□□□□ -0.92
Smim1P0C8K7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.31□□□□□ -0.92
Smim1P0C8K7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Gm15678-201ENSMUST00000117573 960 ntBASIC9.31□□□□□ -0.92
Smim1P0C8K7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.31□□□□□ -0.92
Smim1P0C8K7 Gm18246-201ENSMUST00000221023 728 ntBASIC9.31□□□□□ -0.92
Smim1P0C8K7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.31□□□□□ -0.92
Smim1P0C8K7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.31□□□□□ -0.92
Smim1P0C8K7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.31□□□□□ -0.92
Smim1P0C8K7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms