Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
CcnkO88874 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.14□□□□□ -0.47
CcnkO88874 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
CcnkO88874 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.14□□□□□ -0.47
CcnkO88874 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.14□□□□□ -0.47
CcnkO88874 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.14□□□□□ -0.47
CcnkO88874 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.14□□□□□ -0.47
CcnkO88874 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.14□□□□□ -0.47
CcnkO88874 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.14□□□□□ -0.47
CcnkO88874 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CcnkO88874 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CcnkO88874 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.13□□□□□ -0.47
CcnkO88874 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CcnkO88874 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.13□□□□□ -0.47
CcnkO88874 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CcnkO88874 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CcnkO88874 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CcnkO88874 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.13□□□□□ -0.47
CcnkO88874 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.13□□□□□ -0.47
CcnkO88874 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CcnkO88874 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.13□□□□□ -0.47
CcnkO88874 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CcnkO88874 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcnkO88874 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
CcnkO88874 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.12□□□□□ -0.47
CcnkO88874 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.12□□□□□ -0.47
CcnkO88874 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CcnkO88874 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.12□□□□□ -0.47
CcnkO88874 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.12□□□□□ -0.47
CcnkO88874 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.12□□□□□ -0.47
CcnkO88874 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CcnkO88874 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.12□□□□□ -0.47
CcnkO88874 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.12□□□□□ -0.47
CcnkO88874 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.12□□□□□ -0.47
CcnkO88874 Gm5186-201ENSMUST00000218781 920 ntBASIC12.12□□□□□ -0.47
CcnkO88874 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.12□□□□□ -0.47
CcnkO88874 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcnkO88874 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CcnkO88874 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.11□□□□□ -0.47
CcnkO88874 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcnkO88874 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms