Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cops6O88545 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.55■□□□□ 0.24
Cops6O88545 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.55■□□□□ 0.24
Cops6O88545 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cops6O88545 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Gm6013-201ENSMUST00000212264 699 ntBASIC16.55■□□□□ 0.24
Cops6O88545 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.55■□□□□ 0.24
Cops6O88545 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.55■□□□□ 0.24
Cops6O88545 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.55■□□□□ 0.24
Cops6O88545 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Cops6O88545 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cops6O88545 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.55■□□□□ 0.24
Cops6O88545 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Cops6O88545 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cops6O88545 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cops6O88545 Gm6447-201ENSMUST00000118905 835 ntBASIC16.54■□□□□ 0.24
Cops6O88545 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.54■□□□□ 0.24
Cops6O88545 Gm7029-201ENSMUST00000173226 450 ntBASIC16.54■□□□□ 0.24
Cops6O88545 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.54■□□□□ 0.24
Cops6O88545 Gm37008-201ENSMUST00000195712 319 ntBASIC16.54■□□□□ 0.24
Cops6O88545 Gm43179-201ENSMUST00000198797 275 ntBASIC16.54■□□□□ 0.24
Cops6O88545 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.54■□□□□ 0.24
Cops6O88545 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Cops6O88545 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cops6O88545 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cops6O88545 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Cops6O88545 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cops6O88545 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.53■□□□□ 0.24
Cops6O88545 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Cops6O88545 Gm13123-201ENSMUST00000122173 492 ntBASIC16.53■□□□□ 0.24
Cops6O88545 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Gm38002-201ENSMUST00000193255 180 ntBASIC16.53■□□□□ 0.24
Cops6O88545 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cops6O88545 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Cops6O88545 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.53■□□□□ 0.24
Cops6O88545 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cops6O88545 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cops6O88545 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cops6O88545 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cops6O88545 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cops6O88545 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
Cops6O88545 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cops6O88545 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cops6O88545 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.52■□□□□ 0.24
Cops6O88545 Gm8805-201ENSMUST00000117848 313 ntBASIC16.52■□□□□ 0.24
Cops6O88545 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cops6O88545 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Cops6O88545 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.52■□□□□ 0.24
Cops6O88545 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cops6O88545 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cops6O88545 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.52■□□□□ 0.24
Cops6O88545 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms