Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Gm37598-201ENSMUST00000194506 1301 ntBASIC12.5□□□□□ -0.41
Dkk1O54908 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Zfp983-201ENSMUST00000039726 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.5□□□□□ -0.41
Dkk1O54908 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Dkk1O54908 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Dkk1O54908 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Dkk1O54908 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.5□□□□□ -0.41
Dkk1O54908 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.5□□□□□ -0.41
Dkk1O54908 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Dkk1O54908 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.49□□□□□ -0.41
Dkk1O54908 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.49□□□□□ -0.41
Dkk1O54908 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC12.49□□□□□ -0.41
Dkk1O54908 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 Gm42462-201ENSMUST00000196543 1363 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.49□□□□□ -0.41
Dkk1O54908 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.49□□□□□ -0.41
Dkk1O54908 Gm26238-201ENSMUST00000175538 117 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC12.49□□□□□ -0.41
Dkk1O54908 Gm38225-201ENSMUST00000194001 393 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Gm43487-201ENSMUST00000200331 1031 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 Gm18689-201ENSMUST00000203969 902 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 AL603630.1-201ENSMUST00000214781 147 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC12.49□□□□□ -0.41
Dkk1O54908 AC126275.1-201ENSMUST00000224881 446 ntBASIC12.49□□□□□ -0.41
Dkk1O54908 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Dkk1O54908 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Dkk1O54908 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Dkk1O54908 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Dkk1O54908 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Dkk1O54908 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm13015-201ENSMUST00000118674 204 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Gm11451-201ENSMUST00000118946 630 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm18588-201ENSMUST00000177308 492 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Gm27033-201ENSMUST00000183226 544 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms