Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Gm28631-201ENSMUST00000190740 334 ntBASIC12.82□□□□□ -0.36
Cx3cl1O35188 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cx3cl1O35188 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.82□□□□□ -0.36
Cx3cl1O35188 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.81□□□□□ -0.36
Cx3cl1O35188 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.81□□□□□ -0.36
Cx3cl1O35188 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.81□□□□□ -0.36
Cx3cl1O35188 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.81□□□□□ -0.36
Cx3cl1O35188 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.81□□□□□ -0.36
Cx3cl1O35188 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.81□□□□□ -0.36
Cx3cl1O35188 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cl1O35188 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.8□□□□□ -0.36
Cx3cl1O35188 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Gm5354-201ENSMUST00000182417 973 ntBASIC12.8□□□□□ -0.36
Cx3cl1O35188 Gm27772-201ENSMUST00000184900 187 ntBASIC12.8□□□□□ -0.36
Cx3cl1O35188 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.8□□□□□ -0.36
Cx3cl1O35188 Gm19220-201ENSMUST00000222682 803 ntBASIC12.8□□□□□ -0.36
Cx3cl1O35188 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cx3cl1O35188 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms