Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Alx4O35137 Gm11745-201ENSMUST00000121669 448 ntBASIC12.15□□□□□ -0.46
Alx4O35137 Gm12260-201ENSMUST00000122447 411 ntBASIC12.15□□□□□ -0.46
Alx4O35137 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.15□□□□□ -0.46
Alx4O35137 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.15□□□□□ -0.46
Alx4O35137 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.15□□□□□ -0.46
Alx4O35137 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Alx4O35137 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Alx4O35137 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Alx4O35137 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Alx4O35137 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.15□□□□□ -0.47
Alx4O35137 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Alx4O35137 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Alx4O35137 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Alx4O35137 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Gm12428-201ENSMUST00000119844 727 ntBASIC12.14□□□□□ -0.47
Alx4O35137 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.14□□□□□ -0.47
Alx4O35137 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.14□□□□□ -0.47
Alx4O35137 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.14□□□□□ -0.47
Alx4O35137 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Alx4O35137 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.14□□□□□ -0.47
Alx4O35137 Gm18889-201ENSMUST00000174284 929 ntBASIC12.14□□□□□ -0.47
Alx4O35137 Gm8927-201ENSMUST00000181978 981 ntBASIC12.14□□□□□ -0.47
Alx4O35137 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Alx4O35137 Gm33320-201ENSMUST00000192232 530 ntBASIC12.14□□□□□ -0.47
Alx4O35137 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.14□□□□□ -0.47
Alx4O35137 Dupd1-202ENSMUST00000224735 548 ntBASIC12.14□□□□□ -0.47
Alx4O35137 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.14□□□□□ -0.47
Alx4O35137 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.14□□□□□ -0.47
Alx4O35137 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Gm3222-201ENSMUST00000071282 990 ntBASIC12.14□□□□□ -0.47
Alx4O35137 Gm10175-201ENSMUST00000086013 645 ntBASIC12.14□□□□□ -0.47
Alx4O35137 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Alx4O35137 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.14□□□□□ -0.47
Alx4O35137 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Alx4O35137 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx4O35137 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.13□□□□□ -0.47
Alx4O35137 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.13□□□□□ -0.47
Alx4O35137 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.13□□□□□ -0.47
Alx4O35137 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.13□□□□□ -0.47
Alx4O35137 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Gm21470-201ENSMUST00000187680 696 ntBASIC12.13□□□□□ -0.47
Alx4O35137 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Alx4O35137 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.13□□□□□ -0.47
Alx4O35137 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Alx4O35137 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms