Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.41□□□□□ -0.42
Shisa8J3QNX5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa8J3QNX5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Gm6222-201ENSMUST00000120787 396 ntBASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Mir497b-201ENSMUST00000093601 125 ntBASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa8J3QNX5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Shisa8J3QNX5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Gm2810-201ENSMUST00000118681 990 ntBASIC12.39□□□□□ -0.43
Shisa8J3QNX5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Gm11025-201ENSMUST00000140773 466 ntBASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa8J3QNX5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.39□□□□□ -0.43
Shisa8J3QNX5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms