Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm12337-201ENSMUST00000119634 400 ntBASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm11544-201ENSMUST00000120215 382 ntBASIC7.38□□□□□ -1.23
Herc1E9PZP8 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm6963-201ENSMUST00000147879 379 ntBASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC7.38□□□□□ -1.23
Herc1E9PZP8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm8451-201ENSMUST00000170338 447 ntBASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm7536-201ENSMUST00000077389 444 ntBASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm5453-201ENSMUST00000080866 447 ntBASIC7.38□□□□□ -1.23
Herc1E9PZP8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 Gm25881-201ENSMUST00000157783 103 ntBASIC7.38□□□□□ -1.23
Herc1E9PZP8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Herc1E9PZP8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm6903-201ENSMUST00000160509 1366 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm17070-201ENSMUST00000170463 784 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm15626-201ENSMUST00000117478 868 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm27530-201ENSMUST00000184096 98 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm9204-201ENSMUST00000212641 947 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 AC102368.1-201ENSMUST00000227161 892 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Mir497b-201ENSMUST00000093601 125 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm11978-201ENSMUST00000122315 466 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Gm42632-201ENSMUST00000201707 2411 ntBASIC7.37□□□□□ -1.23
Herc1E9PZP8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Herc1E9PZP8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Gm7627-201ENSMUST00000183205 999 ntBASIC7.36□□□□□ -1.23
Herc1E9PZP8 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Gm18968-201ENSMUST00000221319 862 ntBASIC7.36□□□□□ -1.23
Herc1E9PZP8 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
Herc1E9PZP8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms