Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.72□□□□□ -0.21
Col4a6B1AVK5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm43947-201ENSMUST00000203019 959 ntBASIC13.72□□□□□ -0.21
Col4a6B1AVK5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Daam2-202ENSMUST00000224595 1926 ntBASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Gm26956-201ENSMUST00000182176 986 ntBASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col4a6B1AVK5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col4a6B1AVK5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.71□□□□□ -0.22
Col4a6B1AVK5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col4a6B1AVK5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col4a6B1AVK5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col4a6B1AVK5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col4a6B1AVK5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col4a6B1AVK5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col4a6B1AVK5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Gm45224-201ENSMUST00000208203 414 ntBASIC13.7□□□□□ -0.22
Col4a6B1AVK5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col4a6B1AVK5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm27046-201ENSMUST00000182160 463 ntBASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.69□□□□□ -0.22
Col4a6B1AVK5 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col4a6B1AVK5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms