Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Mir497b-201ENSMUST00000093601 125 ntBASIC11.48□□□□□ -0.57
Col6a4A2AX52 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Gm11793-201ENSMUST00000120433 981 ntBASIC11.48□□□□□ -0.57
Col6a4A2AX52 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.48□□□□□ -0.57
Col6a4A2AX52 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Olfr284-202ENSMUST00000206647 966 ntBASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm10608-202ENSMUST00000213924 676 ntBASIC11.47□□□□□ -0.57
Col6a4A2AX52 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm2991-201ENSMUST00000173338 480 ntBASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.47□□□□□ -0.57
Col6a4A2AX52 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Col6a4A2AX52 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Gm12997-201ENSMUST00000120207 640 ntBASIC11.46□□□□□ -0.57
Col6a4A2AX52 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.46□□□□□ -0.57
Col6a4A2AX52 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a4A2AX52 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms