Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Gm13365-201ENSMUST00000121188 973 ntBASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trbv29A0A0G2LB96 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Gm33320-201ENSMUST00000192232 530 ntBASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv29A0A0G2LB96 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv29A0A0G2LB96 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms