Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcf1Q9QZM3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clcf1Q9QZM3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Clcf1Q9QZM3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.4□□□□□ -0.43
Clcf1Q9QZM3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gm12490-201ENSMUST00000120255 560 ntBASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gm8515-201ENSMUST00000194852 576 ntBASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gm45668-201ENSMUST00000211271 493 ntBASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gm7653-201ENSMUST00000214567 508 ntBASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gm19220-201ENSMUST00000222682 803 ntBASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gm6180-201ENSMUST00000065243 498 ntBASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clcf1Q9QZM3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Gm18018-201ENSMUST00000198273 408 ntBASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Gm18624-201ENSMUST00000220966 658 ntBASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcf1Q9QZM3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms