Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Gm9063-201ENSMUST00000223299 582 ntBASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm14767-201ENSMUST00000121559 586 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm27306-201ENSMUST00000183970 107 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm27680-201ENSMUST00000184192 160 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm29741-201ENSMUST00000192667 421 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm46209-201ENSMUST00000217912 553 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm7775-201ENSMUST00000218871 853 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a2Q9JLR1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gm15653-201ENSMUST00000119247 907 ntBASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a2Q9JLR1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms