Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Gm12390-201ENSMUST00000117897 397 ntBASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Gm43930-201ENSMUST00000203868 845 ntBASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ube3bQ9ES34 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm11803-201ENSMUST00000119966 444 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Proscos-202ENSMUST00000178990 666 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm27847-201ENSMUST00000183711 107 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm27375-201ENSMUST00000183799 107 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Gm25857-201ENSMUST00000082788 129 ntBASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube3bQ9ES34 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ube3bQ9ES34 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.14■□□□□ 0.17
Ube3bQ9ES34 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gm4984-201ENSMUST00000115987 360 ntBASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gm14127-201ENSMUST00000117906 678 ntBASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gm15824-201ENSMUST00000119516 955 ntBASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Gm10156-201ENSMUST00000122364 462 ntBASIC16.14■□□□□ 0.17
Ube3bQ9ES34 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms