Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Chchd1-203ENSMUST00000224633 557 ntBASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lima1Q9ERG0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Gm43474-201ENSMUST00000196415 774 ntBASIC13.48□□□□□ -0.25
Lima1Q9ERG0 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Gm18049-201ENSMUST00000208909 581 ntBASIC13.48□□□□□ -0.25
Lima1Q9ERG0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lima1Q9ERG0 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.48□□□□□ -0.25
Lima1Q9ERG0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lima1Q9ERG0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms