Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2aQ9DB34 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Gm18905-201ENSMUST00000205454 928 ntBASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2aQ9DB34 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Gm15240-201ENSMUST00000118156 720 ntBASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2aQ9DB34 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms