Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp5Q9D7S9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Gm13365-201ENSMUST00000121188 973 ntBASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Gm9824-201ENSMUST00000178707 561 ntBASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Gm6916-202ENSMUST00000205523 195 ntBASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp5Q9D7S9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Gm27494-201ENSMUST00000184735 189 ntBASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Dupd1-202ENSMUST00000224735 548 ntBASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp5Q9D7S9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Gm18206-201ENSMUST00000207027 926 ntBASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Gm10176-201ENSMUST00000159707 2264 ntBASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chmp5Q9D7S9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp5Q9D7S9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms