Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tmem88Q9D0N8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem88Q9D0N8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Gm7506-201ENSMUST00000207758 815 ntBASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem88Q9D0N8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem88Q9D0N8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms