Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf135Q9CWS1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Mir1897-201ENSMUST00000122581 272 ntBASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Gm28630-201ENSMUST00000187806 498 ntBASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Gm7730-201ENSMUST00000212486 454 ntBASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf135Q9CWS1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Rnf135Q9CWS1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf135Q9CWS1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf135Q9CWS1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf135Q9CWS1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf135Q9CWS1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Rnf135Q9CWS1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf135Q9CWS1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Gm33320-201ENSMUST00000192232 530 ntBASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Shd-206ENSMUST00000225145 998 ntBASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rnf135Q9CWS1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms