Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.37□□□□□ -0.27
Trim16Q99PP9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim16Q99PP9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.36□□□□□ -0.27
Trim16Q99PP9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.36□□□□□ -0.27
Trim16Q99PP9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.36□□□□□ -0.27
Trim16Q99PP9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Gm27306-201ENSMUST00000183970 107 ntBASIC13.36□□□□□ -0.27
Trim16Q99PP9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.36□□□□□ -0.27
Trim16Q99PP9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.36□□□□□ -0.27
Trim16Q99PP9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim16Q99PP9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.35□□□□□ -0.27
Trim16Q99PP9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gm27321-201ENSMUST00000185021 205 ntBASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gm44608-201ENSMUST00000206827 855 ntBASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gm9063-201ENSMUST00000223299 582 ntBASIC13.35□□□□□ -0.27
Trim16Q99PP9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.35□□□□□ -0.27
Trim16Q99PP9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.35□□□□□ -0.27
Trim16Q99PP9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.35□□□□□ -0.27
Trim16Q99PP9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim16Q99PP9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.34□□□□□ -0.27
Trim16Q99PP9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Gm7775-201ENSMUST00000218871 853 ntBASIC13.34□□□□□ -0.27
Trim16Q99PP9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.34□□□□□ -0.27
Trim16Q99PP9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim16Q99PP9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms