Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Gm14767-201ENSMUST00000121559 586 ntBASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Gm3436-201ENSMUST00000179930 840 ntBASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Gm27680-201ENSMUST00000184192 160 ntBASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cstf3Q99LI7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Gm22175-201ENSMUST00000175007 78 ntBASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Gm44344-201ENSMUST00000200287 129 ntBASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Gm5867-201ENSMUST00000063197 592 ntBASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cstf3Q99LI7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm12585-201ENSMUST00000117307 290 ntBASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm13385-201ENSMUST00000121089 220 ntBASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm8927-201ENSMUST00000181978 981 ntBASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm10766-202ENSMUST00000194123 606 ntBASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.18□□□□□ -0.3
Cstf3Q99LI7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm3222-201ENSMUST00000071282 990 ntBASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cstf3Q99LI7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms