Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Gm12341-201ENSMUST00000119724 503 ntBASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Gm38144-201ENSMUST00000192790 465 ntBASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.04□□□□□ -0.48
Sf3b5Q923D4 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3b5Q923D4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gm15376-201ENSMUST00000122258 783 ntBASIC12.03□□□□□ -0.48
Sf3b5Q923D4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Mir6392-201ENSMUST00000184924 108 ntBASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gm18307-201ENSMUST00000206864 949 ntBASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3b5Q923D4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3b5Q923D4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sf3b5Q923D4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3b5Q923D4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Sf3b5Q923D4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3b5Q923D4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.02□□□□□ -0.49
Sf3b5Q923D4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b5Q923D4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3b5Q923D4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sf3b5Q923D4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sf3b5Q923D4 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.02□□□□□ -0.49
Sf3b5Q923D4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.02□□□□□ -0.49
Sf3b5Q923D4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.02□□□□□ -0.49
Sf3b5Q923D4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms